Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | SALA_RS12810 | Not Available | - | 2650569 - 2651495 | 35846.1 |
| duf2493 domain-containing protein | SALA_RS12815 | Not Available | - | 2651561 - 2652502 | 35298.8 |
| toprim domain-containing protein | SALA_RS12820 | Not Available | - | 2652821 - 2653873 | 37678.3 |
| m28 family peptidase | SALA_RS12825 | Not Available | - | 2654126 - 2655091 | 35308.4 |
| hypothetical protein | SALA_RS12830 | Not Available | - | 2655095 - 2656693 | 59561.7 |
| parb/repb/spo0j family partition protein | SALA_RS12835 | Not Available | - | 2656915 - 2658999 | 75163.5 |
| duf2958 domain-containing protein | SALA_RS12840 | Not Available | - | 2659123 - 2659524 | 13998.8 |
| duf6771 family protein | SALA_RS12845 | Not Available | + | 2659763 - 2659954 | 6623.95 |
| hypothetical protein | SALA_RS12850 | Not Available | + | 2659956 - 2660285 | 12983.6 |
| hypothetical protein | SALA_RS12855 | Not Available | + | 2660297 - 2660806 | 19106.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.