Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS01155 | Not Available | - | 238839 - 239060 | 8279.99 |
| s24 family peptidase | SALA_RS01160 | Not Available | + | 239198 - 239866 | 23952.9 |
| hypothetical protein | SALA_RS01165 | Not Available | - | 239874 - 240182 | 11268.5 |
| methyl-accepting chemotaxis protein | SALA_RS01170 | B0R5T0 | + | 240361 - 241647 | 44929.3 |
| aquaporin z | SALA_RS01175 | P60925 | + | 241747 - 242472 | 24705.4 |
| utp--glucose-1-phosphate uridylyltransferase galu | SALA_RS01180 | P33696 | - | 242510 - 243373 | 31001.8 |
| ompa family protein | SALA_RS01185 | P37665 | - | 243434 - 243946 | 17971.7 |
| diguanylate cyclase | SALA_RS01190 | Q9ABX9 | - | 243964 - 245190 | 44048.1 |
| yfir family protein | SALA_RS01195 | P64549 | - | 245187 - 245720 | 18459.5 |
| peptide-methionine (s)-s-oxide reductase msra | SALA_RS01200 | B2VHZ5 | - | 245964 - 246497 | 19521.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.