Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | SALA_RS12660 | Not Available | - | 2623679 - 2624011 | 11342.1 |
| p-type conjugative transfer atpase trbb | SALA_RS12665 | Not Available | - | 2624008 - 2624991 | 34857.3 |
| helix-turn-helix transcriptional regulator | SALA_RS12670 | Not Available | + | 2625210 - 2625701 | 17887.8 |
| hypothetical protein | SALA_RS12675 | Not Available | + | 2625761 - 2626093 | 11406.9 |
| hypothetical protein | SALA_RS17350 | Not Available | + | 2626216 - 2626608 | 14163.5 |
| jab domain-containing protein | SALA_RS17355 | B2S6C0 | + | 2626746 - 2627546 | 29340.5 |
| mobf family relaxase | SALA_RS12695 | P14565 | - | 2627631 - 2630441 | 98343.5 |
| type iv secretion system dna-binding domain-containing protein | SALA_RS12700 | Not Available | - | 2630441 - 2632330 | 69861.2 |
| hypothetical protein | SALA_RS12705 | Not Available | - | 2632330 - 2632701 | 13110.6 |
| lytic transglycosylase domain-containing protein | SALA_RS12710 | Not Available | - | 2633048 - 2633776 | 25432.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.