Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS12610 | Not Available | - | 2615345 - 2615644 | 10500.1 |
| duf2274 domain-containing protein | SALA_RS12615 | Not Available | - | 2615744 - 2615965 | 8031.96 |
| trbi/virb10 family protein | SALA_RS12620 | P55406 | - | 2615962 - 2617143 | 40864.2 |
| p-type conjugative transfer protein trbg | SALA_RS12625 | P55404 | - | 2617173 - 2618024 | 30775.8 |
| conjugal transfer protein trbf | SALA_RS12630 | Not Available | - | 2618021 - 2618704 | 25329.8 |
| p-type conjugative transfer protein trbl | SALA_RS12635 | Not Available | - | 2618711 - 2619991 | 42443.6 |
| putative entry exclusion protein trbk-alt | SALA_RS12640 | Not Available | - | 2619988 - 2620242 | 8949.77 |
| p-type conjugative transfer protein trbj | SALA_RS12645 | Not Available | - | 2620244 - 2620963 | 25347.2 |
| conjugal transfer protein trbe | SALA_RS12650 | P54910 | - | 2620969 - 2623413 | 89162.4 |
| virb3 family type iv secretion system protein | SALA_RS12655 | Not Available | - | 2623410 - 2623679 | 9548.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.