Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SALA_RS12455 | P44617 | - | 2582196 - 2582618 | 15206.2 |
| cation transporter | SALA_RS12460 | Not Available | + | 2582723 - 2583385 | 22981.0 |
| duf3703 domain-containing protein | SALA_RS12465 | Not Available | + | 2583448 - 2583819 | 13353.3 |
| hypothetical protein | SALA_RS12470 | Not Available | + | 2583840 - 2584148 | 10845.2 |
| tolc family protein | SALA_RS12475 | P13509 | + | 2584208 - 2585479 | 43518.6 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS12480 | Q44585 | + | 2585484 - 2586632 | 38814.4 |
| efflux rnd transporter permease subunit | SALA_RS12485 | P37972 | + | 2586636 - 2589863 | 115136.0 |
| 30s ribosomal protein s16 | SALA_RS12495 | Not Available | + | 2590619 - 2591844 | 42845.3 |
| heavy metal translocating p-type atpase | SALA_RS12500 | Q9ZHC7 | + | 2592206 - 2594527 | 81292.3 |
| aldehyde dehydrogenase family protein | SALA_RS12505 | P46368 | + | 2594978 - 2596498 | 55191.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.