Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS12400 | Not Available | + | 2569656 - 2570933 | 47085.2 |
| tonb-dependent receptor | SALA_RS12405 | P46359 | - | 2571241 - 2573355 | 77694.6 |
| merr family transcriptional regulator | SALA_RS12415 | P13111 | - | 2574002 - 2574400 | 14506.5 |
| maue/doxx family redox-associated membrane protein | SALA_RS12420 | Not Available | + | 2574481 - 2575302 | 29936.0 |
| hypothetical protein | SALA_RS12425 | Not Available | + | 2575405 - 2575767 | 12491.5 |
| hypothetical protein | SALA_RS12430 | Not Available | + | 2575832 - 2576098 | 9534.52 |
| tolc family protein | SALA_RS12435 | Not Available | + | 2576165 - 2577391 | 43847.9 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS12440 | Q8XEH9 | + | 2577388 - 2578614 | 42400.1 |
| efflux rnd transporter permease subunit | SALA_RS12445 | Q8FK36 | + | 2578611 - 2581745 | 112717.0 |
| copper-binding protein | SALA_RS12450 | Not Available | + | 2581742 - 2582110 | 12521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.