Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | SALA_RS12350 | Not Available | - | 2561269 - 2561853 | 21963.0 |
| periplasmic heavy metal sensor | SALA_RS12355 | Not Available | - | 2561850 - 2562287 | 15982.3 |
| hypothetical protein | SALA_RS12360 | Not Available | - | 2562290 - 2562535 | 8329.32 |
| copper homeostasis periplasmic binding protein copc | SALA_RS12365 | Not Available | + | 2562694 - 2563083 | 13681.0 |
| copper homeostasis membrane protein copd | SALA_RS12370 | P12377 | + | 2563090 - 2564058 | 33697.8 |
| arac family transcriptional regulator | SALA_RS12375 | Not Available | + | 2564091 - 2564780 | 24079.8 |
| class i sam-dependent methyltransferase | SALA_RS12380 | Not Available | + | 2564918 - 2565595 | 24972.2 |
| heavy metal translocating p-type atpase | SALA_RS12385 | Not Available | + | 2565762 - 2568083 | 81027.6 |
| duf4440 domain-containing protein | SALA_RS12390 | Not Available | + | 2568136 - 2568612 | 17165.4 |
| cytochrome c | SALA_RS12395 | Not Available | + | 2568877 - 2569470 | 20945.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.