Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | SALA_RS12300 | Q52811 | - | 2548517 - 2549683 | 41874.7 |
| abc transporter permease subunit | SALA_RS16465 | P45767 | - | 2549754 - 2551946 | 78208.3 |
| amino acid abc transporter substrate-binding protein | SALA_RS12310 | Q52812 | - | 2551943 - 2553013 | 39284.1 |
| lysr substrate-binding domain-containing protein | SALA_RS12315 | P03030 | + | 2553069 - 2553974 | 33130.2 |
| tonb-dependent siderophore receptor | SALA_RS12320 | A7FD14 | - | 2554011 - 2556482 | 88115.1 |
| hypothetical protein | SALA_RS12325 | Not Available | - | 2556724 - 2557071 | 11822.9 |
| duf411 domain-containing protein | SALA_RS12330 | Not Available | - | 2557098 - 2557610 | 17733.2 |
| duf305 domain-containing protein | SALA_RS12335 | Not Available | - | 2557624 - 2558013 | 14422.4 |
| copper resistance protein b | SALA_RS12340 | Not Available | - | 2558106 - 2559317 | 42731.1 |
| copper resistance system multicopper oxidase | SALA_RS12345 | Q47452 | - | 2559314 - 2561149 | 66510.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.