Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | SALA_RS01115 | Not Available | + | 231217 - 231849 | 22988.3 |
| crotonase/enoyl-coa hydratase family protein | SALA_RS01120 | P94549 | + | 231846 - 232649 | 28626.5 |
| is481-like element isspal1 family transposase | SALA_RS01125 | Not Available | + | 232707 - 233657 | 36596.6 |
| is5 family transposase | SALA_RS01130 | Not Available | - | 233676 - 234436 | 28745.7 |
| 30s ribosomal protein s16 | SALA_RS17595 | Not Available | + | 234522 - 234777 | 9157.14 |
| putative o-glycosylation ligase, exosortase a system-associated | SALA_RS01135 | Not Available | - | 234774 - 236156 | 51998.9 |
| hypothetical protein | SALA_RS17260 | Not Available | - | 236149 - 236313 | 6301.54 |
| tigr04063 family pep-cterm/xrta system glycosyltransferase | SALA_RS01140 | Not Available | + | 236380 - 237585 | 43675.6 |
| hypothetical protein | SALA_RS01145 | Not Available | + | 237638 - 238447 | 28455.9 |
| hypothetical protein | SALA_RS01150 | Not Available | - | 238516 - 238842 | 12157.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.