Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SALA_RS12200 | Not Available | - | 2526745 - 2529879 | 112657.0 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS12205 | P77239 | - | 2529876 - 2531108 | 42981.4 |
| tolc family protein | SALA_RS12210 | Not Available | - | 2531105 - 2532334 | 44091.5 |
| hypothetical protein | SALA_RS16895 | Not Available | - | 2532727 - 2533092 | 12527.5 |
| duf1499 domain-containing protein | SALA_RS17340 | Not Available | - | 2533378 - 2534079 | 24870.2 |
| hypothetical protein | SALA_RS12225 | Not Available | + | 2534859 - 2535161 | 10847.0 |
| 30s ribosomal protein s16 | SALA_RS12230 | Not Available | + | 2535542 - 2535898 | 13237.3 |
| is481-like element isspal1 family transposase | SALA_RS12235 | Not Available | - | 2535893 - 2536843 | 36583.6 |
| 30s ribosomal protein s16 | SALA_RS12240 | Not Available | + | 2536901 - 2537818 | 32530.7 |
| duf5990 family protein | SALA_RS12245 | Not Available | - | 2537845 - 2538390 | 19966.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.