Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | SALA_RS12155 | Not Available | + | 2512731 - 2514287 | 54375.8 |
| multidrug effflux mfs transporter | SALA_RS12160 | P32482 | - | 2514466 - 2515710 | 43734.8 |
| hypothetical protein | SALA_RS12165 | Not Available | - | 2515952 - 2516254 | 10427.3 |
| pitrilysin family protein | SALA_RS12170 | P55679 | - | 2516281 - 2519160 | 103535.0 |
| acylase | SALA_RS12175 | Not Available | - | 2519256 - 2521412 | 78849.9 |
| leucyl aminopeptidase | SALA_RS12180 | B3PUV3 | + | 2521569 - 2523137 | 53532.2 |
| hypothetical protein | SALA_RS12185 | Not Available | - | 2523168 - 2523362 | 7233.99 |
| hypothetical protein | SALA_RS12190 | Not Available | - | 2523359 - 2523784 | 15471.5 |
| atp-dependent chaperone clpb | SALA_RS12195 | Q92MK7 | + | 2523934 - 2526513 | 93175.6 |
| hypothetical protein | SALA_RS16890 | Not Available | - | 2526467 - 2526748 | 11009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.