Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | SALA_RS12105 | P0C0L2 | - | 2497243 - 2497671 | 15075.7 |
| duf962 domain-containing protein | SALA_RS12110 | Not Available | - | 2497764 - 2498111 | 13177.8 |
| yaii/yqxd family protein | SALA_RS12115 | Q1GQI7 | - | 2498143 - 2498607 | 16145.6 |
| sulfite exporter taue/safe family protein | SALA_RS12120 | Not Available | - | 2498604 - 2499362 | 26676.9 |
| uracil-dna glycosylase | SALA_RS12125 | Q92LU5 | - | 2499373 - 2500077 | 25020.9 |
| tonb-dependent receptor domain-containing protein | SALA_RS12130 | Not Available | - | 2500247 - 2503351 | 110313.0 |
| phosphoribosyl-atp diphosphatase | SALA_RS12135 | Q1GQI3 | + | 2503512 - 2503841 | 11376.5 |
| histidine triad nucleotide-binding protein | SALA_RS12140 | P26724 | + | 2503973 - 2504350 | 13739.4 |
| alpha-2-macroglobulin | SALA_RS12145 | Q8YM40 | + | 2504437 - 2510277 | 207226.0 |
| penicillin-binding protein 1c | SALA_RS12150 | Not Available | + | 2510440 - 2512629 | 78312.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.