Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | SALA_RS12005 | Q1GQK9 | + | 2477662 - 2479590 | 68730.4 |
| duf3035 domain-containing protein | SALA_RS12010 | Not Available | - | 2479796 - 2480215 | 14047.6 |
| signal peptidase ii | SALA_RS12015 | Q1GQK7 | - | 2480257 - 2480778 | 18660.9 |
| isoleucine--trna ligase | SALA_RS12020 | Q5NQQ7 | - | 2480775 - 2483930 | 118204.0 |
| bifunctional riboflavin kinase/fad synthetase | SALA_RS12025 | P0AG42 | - | 2484071 - 2485000 | 33324.9 |
| dipeptidase | SALA_RS12030 | Not Available | - | 2484997 - 2486178 | 41816.6 |
| dihydrofolate reductase | SALA_RS12035 | P04174 | - | 2486323 - 2486820 | 18209.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SALA_RS12040 | P52559 | - | 2486817 - 2487902 | 37888.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SALA_RS12045 | Q8FYW3 | - | 2487907 - 2488416 | 17080.6 |
| ggdef domain-containing protein | SALA_RS12050 | Q9I310 | + | 2488624 - 2489268 | 23871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.