Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | SALA_RS17585 | Q1RHK6 | + | 2471222 - 2471971 | 26185.3 |
| dmt family transporter | SALA_RS11960 | Not Available | - | 2472068 - 2472526 | 15604.7 |
| 4-oxalocrotonate tautomerase family protein | SALA_RS11965 | P45418 | - | 2472523 - 2472744 | 7878.39 |
| nuclear transport factor 2 family protein | SALA_RS11970 | Not Available | - | 2472758 - 2473234 | 18222.1 |
| voc family protein | SALA_RS11975 | Not Available | - | 2473246 - 2473656 | 14833.8 |
| glutathione s-transferase family protein | SALA_RS11980 | P57109 | - | 2473740 - 2474366 | 22808.2 |
| pyridoxamine 5'-phosphate oxidase family protein | SALA_RS11985 | Not Available | - | 2474369 - 2474995 | 23251.5 |
| lysr family transcriptional regulator | SALA_RS11990 | Not Available | + | 2475138 - 2476028 | 31494.9 |
| mipa/ompv family protein | SALA_RS11995 | Not Available | - | 2476180 - 2477190 | 35940.3 |
| hypothetical protein | SALA_RS12000 | Not Available | + | 2477373 - 2477615 | 8489.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.