Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | SALA_RS11855 | Not Available | + | 2452223 - 2452918 | 25742.0 |
| p-ii family nitrogen regulator | SALA_RS11860 | O54053 | + | 2453252 - 2453590 | 11934.7 |
| ammonium transporter | SALA_RS11865 | P69680 | + | 2453609 - 2455078 | 51002.6 |
| tonb-dependent receptor | SALA_RS11870 | P17315 | + | 2455375 - 2457735 | 84122.0 |
| voc family protein | SALA_RS11875 | Not Available | - | 2458216 - 2458590 | 13457.2 |
| winged helix-turn-helix transcriptional regulator | SALA_RS17335 | Not Available | + | 2458653 - 2459192 | 18906.9 |
| gmc family oxidoreductase | SALA_RS11890 | Q9WWW2 | - | 2459232 - 2460818 | 56869.4 |
| sterol desaturase family protein | SALA_RS11895 | P68434 | - | 2460996 - 2461910 | 35274.5 |
| hypothetical protein | SALA_RS11900 | Not Available | - | 2461903 - 2462307 | 14324.5 |
| tigr01244 family sulfur transferase | SALA_RS11905 | Not Available | - | 2462304 - 2462738 | 14875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.