Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | SALA_RS11805 | Q51363 | - | 2443609 - 2445195 | 57743.8 |
| abc transporter atp-binding protein | SALA_RS11810 | P36879 | - | 2445295 - 2446218 | 33538.2 |
| duf4402 domain-containing protein | SALA_RS11815 | Not Available | + | 2446321 - 2446881 | 19561.4 |
| zinc-finger domain-containing protein | SALA_RS11820 | Not Available | + | 2447010 - 2447213 | 7098.41 |
| metalloprotease tldd | SALA_RS11825 | P0AGG9 | + | 2447265 - 2448707 | 50752.1 |
| hypothetical protein | SALA_RS11830 | Not Available | + | 2448925 - 2450160 | 43239.8 |
| hypothetical protein | SALA_RS11835 | Not Available | + | 2450240 - 2450638 | 14294.2 |
| duf924 family protein | SALA_RS11840 | Not Available | + | 2450777 - 2451346 | 21877.2 |
| pyridoxamine 5'-phosphate oxidase family protein | SALA_RS11845 | B8NM62 | + | 2451375 - 2451941 | 21021.9 |
| duf2007 domain-containing protein | SALA_RS11850 | Not Available | + | 2451941 - 2452153 | 7466.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.