Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | SALA_RS11705 | Not Available | + | 2422439 - 2424793 | 84879.7 |
| chap domain-containing protein | SALA_RS11710 | Not Available | + | 2424998 - 2425582 | 20395.4 |
| duf3297 family protein | SALA_RS11715 | Not Available | - | 2425689 - 2425958 | 9863.56 |
| hypothetical protein | SALA_RS11720 | Not Available | - | 2426073 - 2427230 | 40033.2 |
| site-specific dna-methyltransferase | SALA_RS11725 | Q45489 | + | 2427469 - 2428332 | 32294.0 |
| bglii/bstyi family type ii restriction endonuclease | SALA_RS11730 | Not Available | + | 2428332 - 2428943 | 23465.2 |
| pseudouridine synthase | SALA_RS11735 | Q9HX48 | - | 2429035 - 2429592 | 20325.3 |
| translational gtpase typa | SALA_RS11740 | Q9ZLZ3 | - | 2429807 - 2431639 | 66801.7 |
| hypothetical protein | SALA_RS11745 | Not Available | - | 2431694 - 2432623 | 32320.7 |
| lipopolysaccharide assembly protein lapb | SALA_RS16455 | Not Available | - | 2432623 - 2433546 | 32071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.