Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subunit epsilon | SALA_RS11655 | Q2G5N4 | + | 2414180 - 2414437 | 8833.58 |
| cpaf family protein | SALA_RS11660 | Not Available | + | 2414708 - 2416204 | 54994.9 |
| hypothetical protein | SALA_RS17150 | Not Available | - | 2416334 - 2416519 | 6427.97 |
| class i sam-dependent methyltransferase | SALA_RS11670 | Not Available | + | 2416575 - 2417405 | 29413.8 |
| leucyl/phenylalanyl-trna--protein transferase | SALA_RS11675 | A5V9E5 | + | 2417411 - 2418181 | 26597.8 |
| 30s ribosomal protein s16 | SALA_RS16885 | Not Available | - | 2418217 - 2418603 | 14213.2 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | SALA_RS11685 | Not Available | - | 2418603 - 2418989 | 14261.6 |
| duf192 domain-containing protein | SALA_RS11690 | Not Available | - | 2419052 - 2419507 | 15982.2 |
| recx family transcriptional regulator | SALA_RS11695 | Not Available | - | 2419576 - 2420148 | 20523.6 |
| fatty acyl-amp ligase | SALA_RS11700 | A0A0H3C605 | + | 2420328 - 2422079 | 63243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.