Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | SALA_RS11605 | Not Available | + | 2403015 - 2404559 | 56683.2 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | SALA_RS11610 | Not Available | - | 2404553 - 2405314 | 26037.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | SALA_RS11615 | P26189 | - | 2405311 - 2406348 | 37312.5 |
| duf1203 domain-containing protein | SALA_RS11620 | Not Available | - | 2406345 - 2406815 | 16924.1 |
| s1c family serine protease | SALA_RS11625 | Not Available | + | 2406916 - 2408460 | 53272.5 |
| dienelactone hydrolase family protein | SALA_RS11630 | Q8X8L4 | - | 2408501 - 2409178 | 24687.2 |
| f0f1 atp synthase subunit delta | SALA_RS11635 | A5V3X2 | + | 2409471 - 2410037 | 19232.1 |
| f0f1 atp synthase subunit alpha | SALA_RS11640 | Q1GQS7 | + | 2410077 - 2411606 | 54437.4 |
| f0f1 atp synthase subunit gamma | SALA_RS11645 | Q1GQS6 | + | 2411692 - 2412567 | 31054.6 |
| f0f1 atp synthase subunit beta | SALA_RS11650 | Q1GQS5 | + | 2412592 - 2414133 | 53981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.