Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | SALA_RS11555 | Not Available | + | 2387282 - 2388019 | 25996.3 |
| chromosome segregation protein smc | SALA_RS11560 | Q6N1B7 | + | 2388159 - 2391602 | 121141.0 |
| 4-hydroxybenzoate octaprenyltransferase | SALA_RS11565 | Q9VHS7 | - | 2391765 - 2392673 | 32142.0 |
| tade/tadg family type iv pilus assembly protein | SALA_RS11570 | Not Available | - | 2392720 - 2393379 | 23121.7 |
| tade/tadg family type iv pilus assembly protein | SALA_RS11575 | Not Available | - | 2393376 - 2393957 | 21488.4 |
| pilus assembly protein tadg-related protein | SALA_RS11580 | Not Available | - | 2393954 - 2395954 | 72471.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | SALA_RS11585 | P44627 | + | 2396158 - 2396907 | 27064.0 |
| proprotein convertase p-domain-containing protein | SALA_RS11590 | Not Available | + | 2397075 - 2398985 | 63200.1 |
| glutamate--cysteine ligase | SALA_RS11595 | O23736 | + | 2399034 - 2400407 | 50770.3 |
| primosomal protein n' | SALA_RS11600 | P05445 | + | 2400773 - 2402941 | 77544.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.