Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | SALA_RS11505 | Not Available | - | 2378504 - 2379148 | 22721.0 |
| Trna-cys | Not Available | Not Available | + | 2379346 - 2379419 | Not Available |
| protein-l-isoaspartate o-methyltransferase | SALA_RS11515 | Q1INS6 | + | 2379675 - 2380337 | 22462.4 |
| tolc family outer membrane protein | SALA_RS11520 | Not Available | + | 2380376 - 2381869 | 52597.8 |
| duf2497 domain-containing protein | SALA_RS11525 | Not Available | + | 2381973 - 2382398 | 14599.2 |
| nad(+) diphosphatase | SALA_RS11530 | Q29RH3 | - | 2382600 - 2383469 | 31017.2 |
| serine hydrolase | SALA_RS11535 | Not Available | - | 2383469 - 2384755 | 45144.7 |
| a/g-specific adenine glycosylase | SALA_RS11540 | Q05869 | - | 2384752 - 2385753 | 35984.6 |
| duf721 domain-containing protein | SALA_RS11545 | Not Available | + | 2385938 - 2386522 | 20552.1 |
| thioredoxin domain-containing protein | SALA_RS11550 | Not Available | + | 2386533 - 2387246 | 25359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.