Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SALA_RS11355 | Q1GQY3 | - | 2343349 - 2344311 | 33010.2 |
| polysaccharide deacetylase family protein | SALA_RS11360 | Not Available | + | 2344596 - 2345639 | 37377.1 |
| cell division protein zape | SALA_RS11365 | Q3V384 | - | 2345592 - 2346731 | 41975.4 |
| paai family thioesterase | SALA_RS11370 | Not Available | - | 2346728 - 2347219 | 17652.0 |
| succinate dehydrogenase iron-sulfur subunit | SALA_RS11375 | Q1RGP3 | - | 2347216 - 2347998 | 29391.2 |
| lipopolysaccharide biosynthesis protein | SALA_RS11380 | Not Available | + | 2348128 - 2349672 | 53960.4 |
| had family phosphatase | SALA_RS11385 | Not Available | + | 2349669 - 2350379 | 25626.8 |
| hypothetical protein | SALA_RS11390 | Not Available | + | 2350379 - 2351518 | 42118.7 |
| cdp-alcohol phosphatidyltransferase family protein | SALA_RS11395 | Not Available | + | 2351515 - 2352618 | 40916.0 |
| hit family protein | SALA_RS11400 | Not Available | + | 2352615 - 2353043 | 15130.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.