Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | SALA_RS11305 | A0A0H3C8X7 | + | 2330709 - 2331629 | 33153.7 |
| signal peptide peptidase sppa | SALA_RS11310 | P08395 | + | 2331783 - 2333768 | 69792.6 |
| alpha/beta fold hydrolase | SALA_RS11315 | Q83WC8 | - | 2333868 - 2334773 | 32200.1 |
| trimeric intracellular cation channel family protein | SALA_RS11320 | Q9R9S0 | - | 2335130 - 2335753 | 21337.6 |
| gfa family protein | SALA_RS11325 | Not Available | + | 2335843 - 2336277 | 16143.2 |
| dihydrolipoyl dehydrogenase | SALA_RS11330 | P31046 | - | 2336317 - 2337714 | 49151.3 |
| giy-yig nuclease family protein | SALA_RS11335 | Not Available | - | 2337759 - 2338052 | 11738.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | SALA_RS11340 | Q8GCY1 | - | 2338186 - 2339400 | 42227.9 |
| 2-oxoglutarate dehydrogenase e1 component | SALA_RS11345 | A9M8Q9 | - | 2339422 - 2342244 | 104218.0 |
| succinate--coa ligase subunit alpha | SALA_RS11350 | Q1RH56 | - | 2342333 - 2343223 | 30440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.