Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf418 domain-containing protein | SALA_RS11205 | P25747 | + | 2312828 - 2314078 | 45816.0 |
| hpt domain-containing protein | SALA_RS11210 | Not Available | - | 2314092 - 2314496 | 15067.0 |
| sulfurtransferase tusa family protein | SALA_RS11215 | Not Available | - | 2314613 - 2314837 | 8345.03 |
| ribosome biogenesis gtpase der | SALA_RS11220 | Q2GA15 | - | 2314827 - 2316197 | 49933.7 |
| pqq-binding-like beta-propeller repeat protein | SALA_RS11225 | Not Available | - | 2316236 - 2317570 | 46129.6 |
| tetratricopeptide repeat protein | SALA_RS11230 | Not Available | - | 2317572 - 2318333 | 27024.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SALA_RS11235 | Q1GR07 | - | 2318435 - 2319298 | 30577.2 |
| hypothetical protein | SALA_RS11240 | Not Available | + | 2319426 - 2319848 | 15829.7 |
| helix-turn-helix transcriptional regulator | SALA_RS11245 | Not Available | + | 2319973 - 2320194 | 8148.77 |
| glycerophosphodiester phosphodiesterase | SALA_RS11250 | Q9SD81 | - | 2320325 - 2321392 | 38451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.