Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | SALA_RS11155 | Q1GR22 | - | 2303438 - 2304493 | 38052.5 |
| peptidylprolyl isomerase | SALA_RS11160 | Not Available | - | 2304518 - 2305234 | 25578.5 |
| pantetheine-phosphate adenylyltransferase | SALA_RS11165 | Q1GR20 | - | 2305319 - 2305825 | 18634.9 |
| polyprenyl synthetase family protein | SALA_RS11170 | P22939 | - | 2305825 - 2306736 | 32247.7 |
| exodeoxyribonuclease vii small subunit | SALA_RS11175 | Q2G632 | - | 2306752 - 2307015 | 9112.65 |
| hypothetical protein | SALA_RS11180 | Not Available | + | 2307704 - 2308000 | 10785.1 |
| phosphoribosylformylglycinamidine synthase subunit purl | SALA_RS11185 | Q2NAT8 | + | 2308085 - 2310328 | 79643.2 |
| duf72 domain-containing protein | SALA_RS11190 | Not Available | + | 2310443 - 2311189 | 27982.9 |
| coq4 family protein | SALA_RS11195 | Not Available | - | 2311194 - 2312012 | 30620.6 |
| nitroreductase family protein | SALA_RS11200 | F4KU78 | + | 2312125 - 2312799 | 24061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.