Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | SALA_RS11110 | P47764 | - | 2292062 - 2292736 | 23621.9 |
| ferritin-like domain-containing protein | SALA_RS11115 | P43935 | - | 2292879 - 2293670 | 28964.8 |
| peroxiredoxin | SALA_RS11120 | Q796Y8 | - | 2293670 - 2294131 | 16623.9 |
| bifunctional | SALA_RS11125 | Q985F6 | - | 2294128 - 2296845 | 96780.7 |
| response regulator | SALA_RS11130 | Q0PEV3 | - | 2296991 - 2297785 | 28851.7 |
| nepr family anti-sigma factor | SALA_RS17330 | Not Available | + | 2297997 - 2298167 | 5952.99 |
| trna guanosine(34) transglycosylase tgt | SALA_RS11135 | Q1GR26 | - | 2298168 - 2299295 | 40788.1 |
| hemerythrin domain-containing protein | SALA_RS11140 | Not Available | - | 2299482 - 2299970 | 19037.1 |
| eal domain-containing protein | SALA_RS11145 | Not Available | - | 2300034 - 2302223 | 79047.8 |
| helix-turn-helix domain-containing protein | SALA_RS11150 | Not Available | + | 2302710 - 2303378 | 23406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.