Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | SALA_RS11060 | Q48IV1 | + | 2281255 - 2283231 | 70857.4 |
| hypothetical protein | SALA_RS11065 | Not Available | - | 2283383 - 2284246 | 31610.3 |
| diacylglycerol kinase family protein | SALA_RS11070 | Not Available | - | 2284387 - 2285361 | 34531.1 |
| duf2141 domain-containing protein | SALA_RS11075 | Not Available | - | 2285367 - 2285840 | 16522.0 |
| lps export abc transporter permease lptf | SALA_RS11080 | Not Available | + | 2285973 - 2287181 | 44795.7 |
| lps export abc transporter permease lptg | SALA_RS11085 | Not Available | + | 2287181 - 2288281 | 39530.7 |
| fatty acid desaturase | SALA_RS11090 | A0A0H3C677 | - | 2288319 - 2289425 | 40180.4 |
| hypothetical protein | SALA_RS11095 | A0A0H3C8X0 | + | 2289542 - 2290708 | 43746.8 |
| exodeoxyribonuclease iii | SALA_RS11100 | Not Available | - | 2290718 - 2291488 | 28877.1 |
| iron-sulfur cluster insertion protein erpa | SALA_RS11105 | Q4UZE2 | - | 2291622 - 2291963 | 11646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.