Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | SALA_RS11010 | Not Available | + | 2274208 - 2274792 | 21554.6 |
| putative quinol monooxygenase | SALA_RS11015 | Not Available | + | 2274810 - 2275100 | 10162.1 |
| redox-sensitive transcriptional activator soxr | SALA_RS11020 | Q9ZHI4 | - | 2275594 - 2276064 | 16892.6 |
| voc family protein | SALA_RS11025 | Not Available | + | 2276262 - 2276657 | 14844.2 |
| pyridoxamine 5'-phosphate oxidase family protein | SALA_RS11030 | Not Available | + | 2276723 - 2277187 | 16980.2 |
| is5-like element isspal2 family transposase | SALA_RS11035 | Not Available | + | 2277263 - 2278363 | 40478.4 |
| 30s ribosomal protein s16 | SALA_RS17665 | Not Available | - | 2278537 - 2278792 | 9236.33 |
| pycsar system effector family protein | SALA_RS11045 | Not Available | - | 2278882 - 2279442 | 20620.1 |
| acyl carrier protein | SALA_RS11050 | Not Available | + | 2279593 - 2279829 | 8468.04 |
| serine palmitoyltransferase | SALA_RS11055 | Q93UV0 | + | 2279939 - 2281141 | 43279.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.