Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | SALA_RS10620 | Not Available | + | 2192584 - 2192916 | 12010.4 |
| glutathione s-transferase family protein | SALA_RS10625 | Not Available | - | 2193000 - 2193650 | 23129.1 |
| chase domain-containing protein | SALA_RS10630 | Q2YKK7 | + | 2193821 - 2195500 | 61151.6 |
| laci family dna-binding transcriptional regulator | SALA_RS10635 | O87590 | + | 2195553 - 2196569 | 35786.3 |
| tonb-dependent siderophore receptor | SALA_RS10640 | P81549 | + | 2196772 - 2198862 | 76439.5 |
| hypothetical protein | SALA_RS10645 | Not Available | - | 2198941 - 2199579 | 22809.2 |
| type ii toxin-antitoxin system pard family antitoxin | SALA_RS10650 | Not Available | + | 2199964 - 2200236 | 9710.74 |
| 30s ribosomal protein s16 | SALA_RS16855 | Not Available | + | 2200317 - 2200550 | 8392.79 |
| three-cys-motif partner protein tcmp | SALA_RS16860 | Not Available | - | 2200586 - 2201761 | 43334.9 |
| duf5131 family protein | SALA_RS16865 | Not Available | - | 2201761 - 2202498 | 27867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.