Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1153 domain-containing protein | SALA_RS10345 | Not Available | + | 2143261 - 2143560 | 11320.7 |
| hypothetical protein | SALA_RS10350 | Not Available | + | 2143745 - 2144020 | 9502.86 |
| gnat family n-acetyltransferase | SALA_RS10355 | Not Available | - | 2144457 - 2145104 | 22684.0 |
| translation elongation factor 4 | SALA_RS10360 | Q1GRH5 | - | 2145174 - 2146997 | 67048.0 |
| eco57i restriction-modification methylase domain-containing protein | SALA_RS17390 | Not Available | + | 2147387 - 2149504 | 79245.0 |
| type isp restriction/modification enzyme | SALA_RS17395 | Not Available | + | 2149504 - 2150679 | 44007.0 |
| nuclear transport factor 2 family protein | SALA_RS10370 | Not Available | - | 2150698 - 2151111 | 14801.7 |
| hypothetical protein | SALA_RS10375 | Not Available | - | 2151237 - 2151746 | 16920.4 |
| 50s ribosomal protein l21 | SALA_RS10380 | Q1GRH2 | + | 2151975 - 2152469 | 17292.0 |
| 50s ribosomal protein l27 | SALA_RS10385 | Q1GRH1 | + | 2152519 - 2152788 | 9502.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.