Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2163 domain-containing protein | SALA_RS10120 | Not Available | - | 2100978 - 2101811 | 29337.9 |
| duf2460 domain-containing protein | SALA_RS10125 | Not Available | - | 2101805 - 2104129 | 82841.7 |
| tail tape measure protein | SALA_RS10130 | Not Available | - | 2104129 - 2104704 | 19052.9 |
| hypothetical protein | SALA_RS10210 | Not Available | - | 2114432 - 2114932 | 17229.7 |
| prolyl aminopeptidase | SALA_RS10215 | O32449 | - | 2115059 - 2116147 | 39279.9 |
| s9 family peptidase | SALA_RS10220 | P39839 | + | 2116639 - 2118801 | 76871.0 |
| phosphoribosyltransferase | SALA_RS10225 | Not Available | + | 2118812 - 2119387 | 21655.9 |
| adenosine deaminase | SALA_RS10230 | Q1GRK2 | + | 2119380 - 2120405 | 37284.0 |
| rod shape-determining protein | SALA_RS10235 | A0A0H3C7V4 | - | 2120494 - 2121534 | 36301.1 |
| hypothetical protein | SALA_RS10240 | Not Available | - | 2121705 - 2122193 | 18714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.