Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylcholine/phosphatidylserine synthase | SALA_RS09965 | P9WPG1 | - | 2067861 - 2068643 | 27849.4 |
| phosphatidylserine decarboxylase | SALA_RS09970 | Q1GRP7 | - | 2068645 - 2069379 | 26452.5 |
| nadp-dependent isocitrate dehydrogenase | SALA_RS09975 | P50215 | + | 2069542 - 2070756 | 45195.1 |
| cation:proton antiporter | SALA_RS09980 | O65272 | + | 2071104 - 2072888 | 62620.1 |
| pitrilysin family protein | SALA_RS09985 | P45181 | - | 2072900 - 2075791 | 103794.0 |
| carbon-nitrogen hydrolase family protein | SALA_RS09990 | P0DP68 | + | 2075920 - 2076780 | 30667.5 |
| hypothetical protein | SALA_RS09995 | Not Available | - | 2077152 - 2077382 | 7435.89 |
| nudix domain-containing protein | SALA_RS10000 | Not Available | - | 2077550 - 2078347 | 28579.8 |
| duf4126 domain-containing protein | SALA_RS10005 | Not Available | + | 2078459 - 2079094 | 21691.9 |
| nad(p)/fad-dependent oxidoreductase | SALA_RS10010 | X5CY81 | - | 2079098 - 2080321 | 42782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.