Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative prohead protease | SALA_RS10180 | Not Available | - | 2110339 - 2110773 | 15403.9 |
| Hypothetical protein | SALA_RS10185 | Not Available | - | 2110785 - 2111117 | 11202.6 |
| Portal protein | SALA_RS10190 | Q4UM95 | - | 2111214 - 2112320 | 38540.1 |
| nyn domain-containing protein | SALA_RS16830 | Not Available | - | 2112334 - 2112975 | 24969.8 |
| Large packaging protein | SALA_RS10205 | Not Available | - | 2113125 - 2114435 | 46980.4 |
| chromosomal replication initiator protein dnaa | SALA_RS00010 | Q1GN68 | + | 173 - 1534 | 50096.7 |
| glutathione s-transferase family protein | SALA_RS00015 | Not Available | - | 1682 - 2353 | 25198.9 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | SALA_RS00020 | Q1GN74 | - | 2549 - 3208 | 23944.9 |
| membrane protein insertase yidc | SALA_RS00025 | Q9RNL5 | - | 3205 - 4959 | 64465.6 |
| membrane protein insertion efficiency factor yidd | SALA_RS00030 | Q1GN72 | - | 5006 - 5218 | 7789.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.