Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | SALA_RS00820 | Q9ZED0 | - | 160619 - 161068 | 15639.7 |
| pas domain-containing sensor histidine kinase | SALA_RS00825 | Q9RQQ9 | - | 161199 - 163562 | 84525.0 |
| adenosylhomocysteinase | SALA_RS00830 | Q1GWT5 | - | 163757 - 165175 | 51176.3 |
| hypothetical protein | SALA_RS00835 | Not Available | + | 165576 - 165974 | 14117.0 |
| yqge/algh family protein | SALA_RS00840 | Q1GWT3 | - | 166068 - 166631 | 19912.6 |
| peroxiredoxin | SALA_RS00845 | Q69TY4 | + | 166974 - 167456 | 16747.9 |
| amp nucleosidase | SALA_RS00850 | P0AE13 | + | 167576 - 169057 | 54174.1 |
| atp-dependent clp protease atp-binding subunit clpa | SALA_RS00855 | P05444 | + | 169208 - 171547 | 85299.4 |
| amp-binding protein | SALA_RS00860 | P94547 | - | 171643 - 173307 | 59450.1 |
| hypothetical protein | SALA_RS00865 | Not Available | + | 173440 - 173970 | 19503.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.