Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | SALA_RS00625 | P30341 | - | 117462 - 118886 | 50781.4 |
| yeee/yede thiosulfate transporter family protein | SALA_RS00630 | Not Available | - | 118968 - 119948 | 35075.8 |
| lysr family transcriptional regulator | SALA_RS00635 | P30864 | - | 119945 - 120850 | 32684.6 |
| peroxiredoxin-like family protein | SALA_RS00640 | Not Available | + | 121258 - 121896 | 22852.6 |
| peptide-methionine (r)-s-oxide reductase msrb | SALA_RS00645 | Q92Y46 | + | 121993 - 122436 | 16327.8 |
| peptide-methionine (s)-s-oxide reductase msra | SALA_RS00650 | Q7UJI2 | + | 122439 - 122954 | 19206.2 |
| glutaredoxin 3 | SALA_RS00655 | Not Available | + | 122968 - 123243 | 10114.2 |
| cation diffusion facilitator family transporter | SALA_RS00660 | Not Available | - | 123317 - 124228 | 32126.2 |
| zip family metal transporter | SALA_RS00665 | Not Available | - | 124375 - 125088 | 24094.0 |
| rida family protein | SALA_RS00670 | P39332 | - | 125193 - 125585 | 14437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.