Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | SALA_RS07095 | Not Available | - | 1454520 - 1455179 | 23409.7 |
| duf983 domain-containing protein | SALA_RS07100 | Not Available | - | 1455172 - 1455567 | 13895.1 |
| cytochrome c oxidase subunit 3 | SALA_RS07105 | P06030 | - | 1455569 - 1456444 | 32467.4 |
| cytochrome c oxidase assembly protein | SALA_RS07110 | A3PGX7 | - | 1456524 - 1457084 | 20113.9 |
| hypothetical protein | SALA_RS17315 | Not Available | - | 1457081 - 1457230 | 5812.15 |
| heme o synthase | SALA_RS07115 | Q1GTA5 | - | 1457227 - 1458153 | 33188.4 |
| cytochrome c oxidase subunit i | SALA_RS07120 | P31833 | - | 1458198 - 1459868 | 60800.9 |
| cytochrome c oxidase subunit ii | SALA_RS07125 | Q1RI44 | - | 1459884 - 1460915 | 36199.9 |
| orotate phosphoribosyltransferase | SALA_RS07130 | Q1GTA2 | + | 1461146 - 1461736 | 20720.0 |
| pyridoxine 5'-phosphate synthase | SALA_RS07135 | Q5NLS8 | + | 1461733 - 1462479 | 26789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
