Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | SALA_RS06745 | Q1GTH6 | - | 1395082 - 1396044 | 36467.5 |
| jab domain-containing protein | SALA_RS06750 | Q13UX3 | + | 1396161 - 1396589 | 15640.8 |
| Trna-pro | Not Available | Not Available | + | 1396698 - 1396774 | Not Available |
| n-formylglutamate amidohydrolase | SALA_RS06760 | Not Available | - | 1396958 - 1397833 | 31074.3 |
| cell cycle two-component system response regulator cpdr | SALA_RS06765 | Q2YIF7 | + | 1397974 - 1398351 | 13772.5 |
| Trna-val | Not Available | Not Available | + | 1398423 - 1398497 | Not Available |
| sdr family oxidoreductase | SALA_RS06775 | Q9NUI1 | - | 1398541 - 1399332 | 26869.4 |
| alpha/beta fold hydrolase | SALA_RS06780 | Not Available | + | 1399441 - 1400310 | 32683.4 |
| energy transducer tonb | SALA_RS06785 | Not Available | + | 1400358 - 1401074 | 23912.1 |
| Trna-ser | Not Available | Not Available | + | 1401100 - 1401192 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.