Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase | SALA_RS06405 | Q06457 | + | 1322445 - 1325030 | 92731.9 |
| uroporphyrinogen-iii c-methyltransferase | SALA_RS06410 | Q51701 | + | 1325020 - 1325796 | 26787.6 |
| nucleoside triphosphate pyrophosphohydrolase | SALA_RS06415 | P0AEY4 | + | 1325959 - 1326732 | 27742.6 |
| gtpase hflx | SALA_RS06420 | A0L4B2 | - | 1326710 - 1328008 | 47479.7 |
| rna chaperone hfq | SALA_RS06425 | Q0BT31 | - | 1328059 - 1328559 | 18544.3 |
| sigma-54 dependent transcriptional regulator | SALA_RS06430 | Q04849 | - | 1328670 - 1330055 | 50839.9 |
| atp-binding protein | SALA_RS06435 | Q04850 | - | 1330045 - 1332336 | 83438.0 |
| sigma-54 dependent transcriptional regulator | SALA_RS06440 | P45671 | - | 1332420 - 1333838 | 51119.1 |
| nitrogen regulation protein nr(ii) | SALA_RS06445 | P10578 | - | 1333835 - 1334926 | 39071.1 |
| trna dihydrouridine synthase dusb | SALA_RS06450 | P45672 | - | 1334923 - 1335921 | 35923.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.