Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | SALA_RS06360 | P59078 | + | 1311461 - 1313044 | 59107.9 |
| tatd family hydrolase | SALA_RS06365 | P0AFQ9 | + | 1313044 - 1313820 | 28245.1 |
| mbl fold metallo-hydrolase | SALA_RS06370 | Not Available | + | 1313834 - 1314598 | 28093.6 |
| hypothetical protein | SALA_RS17310 | Not Available | + | 1314595 - 1314771 | 6553.31 |
| antar domain-containing response regulator | SALA_RS06375 | Not Available | + | 1314967 - 1315548 | 21244.8 |
| cmpa/nrta family abc transporter substrate-binding protein | SALA_RS06380 | P73450 | + | 1315545 - 1316756 | 43506.0 |
| nark/nasa family nitrate transporter | SALA_RS06385 | P42432 | + | 1317017 - 1318252 | 42326.7 |
| hypothetical protein | SALA_RS06390 | Not Available | + | 1318255 - 1319457 | 43221.8 |
| nitrite reductase large subunit nirb | SALA_RS06395 | P42435 | + | 1319457 - 1321934 | 88547.1 |
| nitrite reductase small subunit nird | SALA_RS06400 | Not Available | + | 1321931 - 1322275 | 12030.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.