Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | SALA_RS06305 | Q45619 | - | 1302473 - 1303240 | 27864.7 |
| is21 family transposase | SALA_RS06310 | Not Available | - | 1303230 - 1304750 | 57634.4 |
| sulfite exporter taue/safe family protein | SALA_RS06315 | P55478 | - | 1304845 - 1305270 | 14974.5 |
| 30s ribosomal protein s16 | SALA_RS16720 | Not Available | + | 1305376 - 1306174 | 30023.6 |
| Trna-ser | Not Available | Not Available | + | 1306508 - 1306597 | Not Available |
| lytic transglycosylase domain-containing protein | SALA_RS06335 | P41052 | + | 1306740 - 1307804 | 38806.1 |
| septal ring lytic transglycosylase rlpa family protein | SALA_RS17560 | Q8ZDG6 | + | 1307788 - 1308750 | 32946.5 |
| d-alanyl-d-alanine carboxypeptidase family protein | SALA_RS06345 | P44466 | + | 1308750 - 1309745 | 35033.7 |
| dtmp kinase | SALA_RS06350 | A5V3I6 | + | 1309822 - 1310445 | 22398.8 |
| dna polymerase iii subunit delta' | SALA_RS06355 | P28631 | + | 1310433 - 1311422 | 35778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
