Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SALA_RS00530 | Not Available | - | 102403 - 103683 | 43119.0 |
| dm13 domain-containing protein | SALA_RS00535 | Not Available | - | 103680 - 103928 | 9008.05 |
| peroxiredoxin | SALA_RS00540 | Not Available | - | 103932 - 104402 | 17337.7 |
| duf2218 domain-containing protein | SALA_RS00545 | Not Available | - | 104452 - 104742 | 10718.7 |
| duf1330 domain-containing protein | SALA_RS00550 | Not Available | - | 104813 - 105103 | 10585.4 |
| heme-binding protein | SALA_RS00555 | Q8ZNR5 | - | 105166 - 105597 | 15002.8 |
| zinc-binding alcohol dehydrogenase family protein | SALA_RS00560 | Q6G7C8 | - | 105651 - 106664 | 36022.3 |
| sulfite oxidase-like oxidoreductase | SALA_RS00565 | O32103 | + | 107168 - 107773 | 22627.8 |
| ferredoxin reductase | SALA_RS00570 | Q53563 | + | 107766 - 108512 | 26835.1 |
| thiolase family protein | SALA_RS00575 | B2VJ10 | + | 108571 - 109836 | 44591.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.