Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | SALA_RS06105 | Q9X3X7 | + | 1251170 - 1253719 | 93074.5 |
| gtpase era | SALA_RS06110 | Q2NB82 | - | 1253772 - 1254665 | 32943.9 |
| ribonuclease iii | SALA_RS06115 | Q1GTU3 | - | 1254662 - 1255342 | 24046.6 |
| signal peptidase i | SALA_RS06120 | Not Available | - | 1255339 - 1256220 | 32172.5 |
| glucose-6-phosphate isomerase | SALA_RS06125 | Q1GTU1 | + | 1256425 - 1257930 | 53613.4 |
| glutathione-disulfide reductase | SALA_RS06130 | P48639 | + | 1258022 - 1259368 | 48314.7 |
| short-chain fatty acyl-coa regulator family protein | SALA_RS06135 | Q3J4E6 | - | 1259412 - 1260821 | 51954.1 |
| 30s ribosomal protein s16 | SALA_RS06140 | Q168G2 | + | 1260931 - 1262462 | 55965.5 |
| hypothetical protein | SALA_RS17095 | Not Available | + | 1262473 - 1262979 | 18403.8 |
| methylmalonyl-coa epimerase | SALA_RS06150 | Q3IZP4 | + | 1262976 - 1263416 | 15635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.