Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | SALA_RS05660 | Q9A3Q9 | + | 1159295 - 1160611 | 46939.2 |
| cell wall metabolism sensor histidine kinase walk | SALA_RS05665 | P23621 | - | 1160608 - 1161840 | 44513.4 |
| hypothetical protein | SALA_RS05670 | Not Available | + | 1161991 - 1162401 | 14311.9 |
| fumarylacetoacetate hydrolase family protein | SALA_RS05675 | Not Available | + | 1162461 - 1163462 | 35606.0 |
| type ii secretion system f family protein | SALA_RS05680 | Not Available | - | 1163525 - 1164568 | 37907.1 |
| type ii secretion system f family protein | SALA_RS05685 | Not Available | - | 1164582 - 1165514 | 33800.2 |
| pilus assembly protein cpae | SALA_RS05690 | Not Available | - | 1165611 - 1166879 | 45379.7 |
| cpad family pilus assembly protein | SALA_RS05695 | Not Available | - | 1166876 - 1167517 | 22338.2 |
| type ii and iii secretion system protein family protein | SALA_RS05700 | P55702 | - | 1167543 - 1169024 | 51610.6 |
| flp pilus assembly protein cpab | SALA_RS05705 | Not Available | - | 1169026 - 1170063 | 36105.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.