Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | SALA_RS05510 | Not Available | - | 1122345 - 1122743 | 14546.4 |
| gcra family cell cycle regulator | SALA_RS05515 | Not Available | - | 1122753 - 1123445 | 24427.3 |
| abc transporter permease | SALA_RS05520 | Not Available | + | 1123565 - 1124437 | 31092.9 |
| heat shock protein hspq | SALA_RS05525 | Not Available | - | 1124446 - 1124820 | 14114.5 |
| yip1 family protein | SALA_RS05530 | Not Available | + | 1124996 - 1125625 | 21348.0 |
| Trna-ser | Not Available | Not Available | + | 1125685 - 1125774 | Not Available |
| amidohydrolase family protein | SALA_RS05540 | Not Available | - | 1125857 - 1129093 | 116383.0 |
| caib/baif coa-transferase family protein | SALA_RS05545 | K3VD64 | + | 1129237 - 1130415 | 41253.5 |
| glutathione-dependent disulfide-bond oxidoreductase | SALA_RS05550 | Q46845 | + | 1130492 - 1131373 | 32577.6 |
| tade/tadg family type iv pilus assembly protein | SALA_RS05555 | Not Available | + | 1131591 - 1131980 | 13541.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.