Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | SALA_RS05460 | Not Available | + | 1112939 - 1113331 | 13292.1 |
| dna repair protein reco | SALA_RS05465 | A5VEW5 | + | 1113319 - 1113933 | 21744.6 |
| 3-isopropylmalate dehydrogenase | SALA_RS05470 | Q2G4X5 | + | 1114103 - 1115149 | 36064.4 |
| plp-dependent aspartate aminotransferase family protein | SALA_RS05475 | P9WGB4 | + | 1115155 - 1116360 | 43623.1 |
| co2+/mg2+ efflux protein apag | SALA_RS05480 | Q2VZE7 | + | 1116378 - 1116779 | 14264.8 |
| lysr family transcriptional regulator | SALA_RS05485 | P52658 | + | 1116776 - 1117567 | 27735.2 |
| tm2 domain-containing protein | SALA_RS05490 | Not Available | + | 1117631 - 1117930 | 11261.8 |
| serine hydrolase | SALA_RS05495 | Not Available | - | 1117927 - 1119258 | 46933.1 |
| dna topoisomerase iv subunit b | SALA_RS05500 | O54479 | - | 1119311 - 1121290 | 72383.3 |
| outer membrane protein | SALA_RS05505 | Not Available | + | 1121459 - 1122292 | 29023.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.