Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydbh domain-containing protein | SALA_RS05415 | Not Available | + | 1103920 - 1106475 | 88539.4 |
| ynbe family lipoprotein | SALA_RS16700 | Not Available | + | 1106472 - 1106684 | 7797.56 |
| ydbl family protein | SALA_RS05420 | Not Available | + | 1106699 - 1107103 | 14093.8 |
| atpz/atpi family protein | SALA_RS05425 | Not Available | + | 1107316 - 1107636 | 11398.8 |
| f0f1 atp synthase subunit a | SALA_RS05430 | Q1GU79 | + | 1107705 - 1108490 | 28416.8 |
| f0f1 atp synthase subunit c | SALA_RS05435 | Q4FPE8 | + | 1108531 - 1108758 | 7421.28 |
| h+-transporting two-sector atpase subunit b/b' | SALA_RS05440 | Not Available | + | 1108838 - 1109338 | 17253.6 |
| atp synthase subunit b | SALA_RS05445 | Q1GU76 | + | 1109331 - 1109861 | 18408.2 |
| sdr family oxidoreductase | SALA_RS05450 | P39577 | - | 1110108 - 1110827 | 24823.6 |
| excinuclease abc subunit uvrc | SALA_RS05455 | Q1GU73 | + | 1110898 - 1112832 | 71218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.