Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | SALA_RS05370 | Q2G8S8 | - | 1096103 - 1096897 | 26943.1 |
| tryptophan synthase subunit beta | SALA_RS05375 | Q2G8S7 | - | 1097097 - 1098317 | 43494.2 |
| phosphoribosylanthranilate isomerase | SALA_RS05380 | Q2N9N2 | - | 1098420 - 1099049 | 22428.2 |
| orotidine-5'-phosphate decarboxylase | SALA_RS05385 | Q1GU89 | - | 1099191 - 1099865 | 23549.7 |
| lipopolysaccharide assembly protein lapa domain-containing protein | SALA_RS05390 | Not Available | - | 1099862 - 1100215 | 12866.0 |
| adenylosuccinate lyase | SALA_RS05395 | P12047 | - | 1100283 - 1101599 | 48242.9 |
| calcium-binding protein | SALA_RS05400 | Not Available | + | 1101791 - 1102261 | 15723.2 |
| dna repair protein radc | SALA_RS05405 | Q2J299 | - | 1102414 - 1103097 | 25059.2 |
| hypothetical protein | SALA_RS17080 | Not Available | + | 1103152 - 1103310 | 5759.05 |
| hypothetical protein | SALA_RS16695 | Not Available | + | 1103376 - 1103789 | 14851.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.