Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| epoxide hydrolase family protein | SALA_RS00420 | Q06816 | - | 85527 - 86873 | 49033.3 |
| sdr family oxidoreductase | SALA_RS00425 | Q9FYL6 | - | 86908 - 87717 | 27913.6 |
| lysr substrate-binding domain-containing protein | SALA_RS00430 | P76250 | - | 87851 - 88735 | 32046.7 |
| tetr/acrr family transcriptional regulator | SALA_RS00435 | P39334 | - | 89025 - 89555 | 18696.0 |
| sdr family oxidoreductase | SALA_RS00440 | P39333 | + | 89692 - 90405 | 24749.6 |
| sirb1 family protein | SALA_RS00455 | Not Available | - | 90958 - 91749 | 28844.6 |
| vpguxxt family thioredoxin-like (seleno)protein, type 2 | SALA_RS00460 | Not Available | - | 91752 - 92687 | 34494.1 |
| ribose-5-phosphate isomerase rpia | SALA_RS00465 | Q1GX07 | + | 93158 - 93844 | 24201.3 |
| marr family winged helix-turn-helix transcriptional regulator | SALA_RS00470 | Not Available | + | 94169 - 94663 | 17749.3 |
| tetr/acrr family transcriptional regulator | SALA_RS00475 | Not Available | - | 94707 - 95333 | 23125.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.