Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell wall hydrolase | SALA_RS05270 | Not Available | - | 1076498 - 1077640 | 40804.6 |
| cysteine synthase a | SALA_RS05275 | Q59447 | - | 1077650 - 1078570 | 32647.4 |
| mfs transporter | SALA_RS05280 | Not Available | - | 1078567 - 1079880 | 46078.9 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SALA_RS05285 | A9MN78 | - | 1080233 - 1081531 | 45843.0 |
| duf1674 domain-containing protein | SALA_RS05290 | Not Available | + | 1081584 - 1081793 | 7515.79 |
| sapc family protein | SALA_RS05295 | Not Available | - | 1081853 - 1082632 | 28681.6 |
| fad-binding oxidoreductase | SALA_RS05300 | O23240 | - | 1082741 - 1084165 | 49482.3 |
| hypothetical protein | SALA_RS05305 | Not Available | + | 1084348 - 1084872 | 19243.5 |
| dead/deah box helicase | SALA_RS05310 | P25888 | + | 1084987 - 1086363 | 49989.9 |
| is5 family transposase | SALA_RS05315 | Not Available | + | 1086581 - 1087341 | 28745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.