Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SALA_RS05165 | Not Available | - | 1058768 - 1059856 | 38706.2 |
| hypothetical protein | SALA_RS05170 | Not Available | - | 1059882 - 1060139 | 8701.54 |
| imp dehydrogenase | SALA_RS05175 | Q9KH33 | + | 1060403 - 1061860 | 50938.4 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SALA_RS05180 | Q5SK01 | + | 1062032 - 1063222 | 41322.1 |
| tetratricopeptide repeat protein | SALA_RS05185 | Not Available | + | 1063255 - 1063785 | 18396.2 |
| agmatine deiminase family protein | SALA_RS05190 | A4VFL7 | - | 1064200 - 1065183 | 34859.2 |
| m28 family metallopeptidase | SALA_RS05195 | Not Available | - | 1065202 - 1066893 | 60825.3 |
| ferredoxin--nadp reductase | SALA_RS05205 | Q9L6V3 | + | 1067504 - 1068319 | 29800.9 |
| lysophospholipid acyltransferase family protein | SALA_RS05210 | Not Available | + | 1068389 - 1069021 | 23485.9 |
| duf1295 domain-containing protein | SALA_RS05215 | Not Available | + | 1069018 - 1069827 | 29467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.